Basic Information
Locus ID:
TC05G1957
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 81662196 | 81666755 | - | TC05G1957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 73,034.53 Da | 49.75 | 77.69 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 15 | 271 | 5.44205E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 15 | 270 | 1.0E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 296 | 3.24E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 89 | 4.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 280 | 6.2E-58 | - |
| SMART | SM00220 | serkin_6 | 15 | 271 | 2.3E-87 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 271 | 47.127716 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 44 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 138 | 150 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 537 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_010672750.1 | serine/threonine-protein kinase Nek6 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9RN18 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_048350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology