Basic Information
Locus ID:
TC05G1754
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 75860709 | 75863317 | + | TC05G1754 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 51,849.90 Da | 51.27 | 73.26 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 325 | 365 | 6.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 295 | 320 | 0.069 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 414 | 450 | 1.4E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 174 | 451 | 8.24E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 126 | 452 | 2.1E-110 | IPR015943 |
| SMART | SM00320 | WD40_4 | 171 | 212 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 214 | 255 | 4.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 285 | 320 | 0.02 | IPR001680 |
| SMART | SM00320 | WD40_4 | 411 | 450 | 1.2E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 323 | 365 | 2.6E-5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 295 | 329 | 9.40565 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 418 | 451 | 14.217871 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 418 | 451 | 11.761044 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 437 | 451 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_017649095.1 | PREDICTED: protein FIZZY-RELATED 3 isoform X1 [Gossypium arboreum] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G9GBG8 | Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24825 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology