Basic Information
Locus ID:
TC05G0944
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 42811955 | 42813262 | + | TC05G0944 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 48,248.13 Da | 50.72 | 101.56 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 80 | 412 | 1.15E-9 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 26 | 426 | 7.7E-10 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 65 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02840.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_010271201.1 | PREDICTED: U-box domain-containing protein 21-like [Nelumbo nucifera] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A1V1I2 | RING-type E3 ubiquitin transferase OS=Morella rubra OX=262757 GN=CJ030_MR7G027917 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology