Basic Information
Locus ID:
TC05G0599
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 21974128 | 21980847 | - | TC05G0599 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 77,769.69 Da | 44.58 | 86.46 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 283 | 313 | 0.0081254 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 421 | 686 | 5.8E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.8E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 115 | 175 | 1.9E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 231 | 1.59E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 686 | 1.64E-66 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 247 | 3.0E-45 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 710 | 2.4E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 390 | 495 | 3.6E-25 | - |
| SMART | SM00369 | LRR_typ_2 | 138 | 161 | 6.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 208 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 116 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 162 | 185 | 22.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 689 | 33.658016 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 382 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021847454.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Spinacia oleracea] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QZE1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_123980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology