Basic Information
Locus ID:
TC05G0198
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7692083 | 7696205 | + | TC05G0198 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 117,848.84 Da | 35.95 | 94.81 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 98 | 4.8E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 751 | 1028 | 2.3E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 295 | 353 | 3.4E-11 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 104 | 455 | 3.69E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 751 | 1031 | 2.02E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 391 | 647 | 1.39E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 739 | 830 | 4.0E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 171 | 264 | 3.5E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 170 | 1.8E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 361 | 1.4E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 831 | 1045 | 1.0E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 370 | 656 | 1.1E-72 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 148 | 172 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 462 | 486 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 365 | 389 | 60.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 748 | 1035 | 4.2E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 293 | 316 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 748 | 1035 | 36.597885 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 882 | 894 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 462 | 475 | 7.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 320 | 333 | 7.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006421630.1 | leucine-rich repeat receptor-like protein kinase TDR, partial [Citrus clementina] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P6G0Z0 | leucine-rich repeat receptor-like protein kinase TDR OS=Ziziphus jujuba OX=326968 GN=LOC107414195 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology