Basic Information
Locus ID:
TC05G0071
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2962598 | 2968225 | - | TC05G0071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 62,376.53 Da | 38.81 | 84.74 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 446 | 508 | 1.58083E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 69 | 326 | 4.42471E-136 | - |
| Pfam | PF13499 | EF-hand domain pair | 445 | 508 | 3.9E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 70 | 327 | 5.6E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 375 | 434 | 9.6E-10 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 335 | 1.48E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 351 | 520 | 1.17E-43 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 154 | 1.5E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 155 | 335 | 1.7E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 336 | 511 | 4.8E-51 | - |
| SMART | SM00054 | efh_1 | 446 | 474 | 3.5E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 374 | 402 | 3.6E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 410 | 438 | 0.037 | IPR002048 |
| SMART | SM00220 | serkin_6 | 69 | 327 | 1.5E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 482 | 510 | 1.6E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 442 | 477 | 14.262346 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 478 | 513 | 13.816021 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 406 | 441 | 10.161722 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 327 | 48.809662 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 370 | 405 | 14.457615 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 419 | 431 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 455 | 467 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 98 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 189 | 201 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 491 | 503 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 33 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_028064512.1 | calcium-dependent protein kinase 10-like [Camellia sinensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7AT43 | Putative calcium-dependent protein kinase 10-like OS=Davidia involucrata OX=16924 GN=Din_029200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology