Basic Information
Locus ID:
TC04G2890
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 113374317 | 113378134 | + | TC04G2890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 110,252.99 Da | 36.80 | 102.86 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 517 | 531 | 1.7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 707 | 985 | 2.3E-44 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 80 | 1.6E-7 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 130 | 145 | 0.83 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 694 | 985 | 9.71E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 289 | 7.48E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 244 | 624 | 4.42E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 638 | 3.4E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 151 | 7.0E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 787 | 1000 | 1.1E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 334 | 4.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 786 | 2.5E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 238 | 1.2E-21 | IPR032675 |
| SMART | SM00220 | serkin_6 | 706 | 985 | 1.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 986 | 38.152626 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021614141.1 | receptor protein kinase CLAVATA1 [Manihot esculenta] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2C9VWB0 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_05G145600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology