Basic Information
Locus ID:
TC04G2883
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Endoplasmin homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 112908692 | 112915619 | - | TC04G2883 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 93,709.34 Da | 37.57 | 78.33 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 87 | 277 | 1.21614E-98 | - |
| Pfam | PF00183 | Hsp90 protein | 259 | 793 | 5.9E-220 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 101 | 256 | 2.8E-12 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 644 | 766 | 8.11E-34 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 345 | 625 | 1.29E-89 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 78 | 287 | 4.71E-71 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 65 | 297 | 1.6E-92 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 538 | 625 | 1.6E-37 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 344 | 537 | 1.2E-72 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 632 | 778 | 1.3E-57 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 100 | 257 | 9.0E-9 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 54 | 815 | 2.5E-259 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 98 | 107 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 263 | 281 | 3.2E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 99 | 121 | 3.2E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 168 | 185 | 3.2E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 150 | 167 | 3.2E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 245 | 262 | 3.2E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 193 | 215 | 3.2E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 78 | 98 | 3.2E-71 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 75 | 768 | 26.320759 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 320 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24190.1 | Chaperone protein htpG family protein. encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. | 0 |
| RefSeq | XP_010691883.1 | endoplasmin homolog [Beta vulgaris subsp. vulgaris] | 0 |
| P35016 | Endoplasmin homolog OS=Catharanthus roseus OX=4058 GN=HSP90 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1J6JUR6 | Endoplasmin-like protein OS=Nicotiana attenuata OX=49451 GN=HSP90-7_5 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology