Basic Information
Locus ID:
TC04G2765
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 109539765 | 109542781 | - | TC04G2765 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 106,972.53 Da | 38.89 | 102.12 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 502 | 522 | 1.9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 93 | 112 | 1.2 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 63 | 3.1E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 649 | 923 | 1.0E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 213 | 272 | 2.2E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 636 | 925 | 1.62E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 68 | 346 | 4.24E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 252 | 542 | 2.35E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 176 | 2.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 581 | 5.3E-72 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 277 | 1.2E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 732 | 954 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 630 | 731 | 4.4E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 428 | 451 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 187 | 200.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 647 | 932 | 3.7E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 499 | 523 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 235 | 258 | 15.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 647 | 925 | 38.237431 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 501 | 524 | 7.365424 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 653 | 676 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 775 | 787 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 93 | 106 | 2.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 499 | 512 | 2.5E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 942 | 963 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49660.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021856418.1 | receptor protein-tyrosine kinase CEPR1 [Spinacia oleracea] | 0 |
| Q9FGL5 | Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis thaliana OX=3702 GN=CEPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8DW98 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_012160 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg10765, jg22673 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_8826, gene_8827 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah036499, Ah036501 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg39569, Sbi_jg54766, Sbi_jg54767 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14767 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00028524 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl12644, Sgl12660, Sgl17912 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000018338, gene:ENSEOMG00000033609 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1AG0020340, CQ.Regalona.r1.1AG0020350 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30042520, pistato.v30046880 |
| Apiaceae | Apium graveolens | 1 | Ag4G01883 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G019310 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103705713 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_03.725.V1.1, AsparagusV1_03.726.V1.1 ... |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G24679 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G49660.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012576m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g10770.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g026470.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2727 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2869 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g14320 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g31550 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-1180, nbisL1-mrna-12398 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.276 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00037128 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G23384, Lb7G32875 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0399350, gene-QOZ80_5BG0448040 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0421040.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000148, gene-QYE76_000409 |
| Poaceae | Oryza coarctata | 2 | Oco23G011130, Oco24G010950 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g43660.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G166200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G019810, Chr06G020740 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G029500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG002150, gene_TRIDC5BG001960 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G013100.1, TraesCS5B02G011300.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb032940_P001, Zm00001eb134240_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-44428, nbis-gene-47427 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25400, Zma_g26193 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG12.1735, evm.TU.LG12.1736, evm.TU.LG12.1737 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g26970 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.857 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-9377 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7524 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20587 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.246 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003363 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21288 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-17079 |
| Salicaceae | Populus euphratica | 1 | populus_peu32123 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132609148, gene-LOC132627688 |
| Solanaceae | Solanum chilense | 1 | SOLCI005026300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107017804 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.31167_chr11_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2765 |
| Zosteraceae | Zostera marina | 1 | Zosma06g02810.v3.1 |