Basic Information
Locus ID:
TC04G2514
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Hippocampus abundant transcript 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 101327537 | 101338161 | - | TC04G2514 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 50,525.30 Da | 35.89 | 104.86 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 13 | 412 | 2.13883E-57 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 13 | 383 | 2.2E-27 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 13 | 414 | 5.75E-36 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 10 | 415 | 5.6E-39 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_028056471.1 | hippocampus abundant transcript 1 protein-like isoform X1 [Camellia sinensis] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B7ALY3 | Putative hippocampus abundant transcript-like protein 1 OS=Davidia involucrata OX=16924 GN=Din_027140 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology