Basic Information
Locus ID:
TC04G2006
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 86223277 | 86223821 | + | TC04G2006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 13,045.93 Da | 53.35 | 79.05 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 105 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42785.1 | 0 | |
| RefSeq | XP_021285419.1 | uncharacterized protein LOC110417404 [Herrania umbratica] | 0 |
| TrEMBL | A0A822ZGI6 | Secreted protein OS=Nelumbo nucifera OX=4432 GN=HUJ06_015081 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg22888 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_15674 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah019934 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg38200 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15522 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl01614 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0012560, CQ.Regalona.r1.3BG0012660 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30046630 |
| Apiaceae | Apium graveolens | 1 | Ag4G02304 |
| Arecaceae | Cocos nucifera | 1 | COCNU_05G010340 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC108511170 |
| Asteraceae | Flaveria trinervia | 2 | Ftri10G12381, Ftri1G28378 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G42785.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10003407m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g07440.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB04g013350.2N, BniB04g017970.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1579 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G1705, Cgl03G1707 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g09560 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.594 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00002461, Pov_00002485, Pov_00015445 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb0G37762 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG08.221 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g20580 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.1159 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-9033 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13905 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-15449 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000018l.156 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3012 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20280 |
| Salicaceae | Populus euphratica | 3 | populus_peu15234, populus_peu32897, populus_peu33233 |
| Solanaceae | Solanum chilense | 2 | SOLCI002108800, SOLCI002963300 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2006 |