Basic Information
Locus ID:
TC04G1639
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 72085627 | 72088163 | - | TC04G1639 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 67,598.11 Da | 32.82 | 67.31 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 261 | 391 | 3.07953E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 460 | 590 | 6.05982E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 23 | 153 | 2.06888E-51 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 459 | 590 | 2.0E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 23 | 154 | 1.3E-34 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 261 | 392 | 1.8E-28 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 12 | 154 | 8.77E-46 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 446 | 590 | 1.44E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 250 | 391 | 5.1E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 439 | 590 | 3.3E-52 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 237 | 392 | 1.4E-48 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 152 | 6.0E-59 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 459 | 591 | 7.7E-42 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 23 | 154 | 4.8E-46 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 261 | 393 | 2.6E-35 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 250 | 393 | 47.83186 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 12 | 154 | 55.654114 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 448 | 591 | 48.957363 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 248 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_048495353.1 | jacalin-related lectin 3 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2N9IGY5 | Jacalin-related lectin 3-like OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51386 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology