Basic Information
Locus ID:
TC04G1460
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Ordered Locus Names sll0103
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 66077319 | 66079937 | + | TC04G1460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 57,899.34 Da | 38.00 | 86.33 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 412 | 474 | 1.0E-12 | IPR032838 |
| Pfam | PF00092 | von Willebrand factor type A domain | 64 | 221 | 1.2E-21 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 60 | 222 | 4.3E-28 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 64 | 237 | 1.0E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 62 | 231 | 3.2E-19 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 64 | 238 | 17.561222 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 467 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_028110410.1 | E3 ubiquitin-protein ligase WAV3-like [Camellia sinensis] | 0 |
| TrEMBL | A0A7J7HFK2 | VWFA domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_012691 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology