Basic Information
Locus ID:
TC04G1454
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 65794842 | 65836426 | + | TC04G1454 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 83,025.80 Da | 34.28 | 76.69 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 387 | 401 | 0.065 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 537 | 552 | 0.0033 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 136 | 553 | 1.06E-25 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 132 | 332 | 2.1E-10 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 402 | 626 | 4.0E-21 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002524160.1 | uncharacterized protein LOC8274807 [Ricinus communis] | 0 |
| TrEMBL | B9SDU1 | Peptidase_S9 domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1712450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology