Basic Information
Locus ID:
TC04G1452
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Ordered Locus Names sll0103
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 65737252 | 65742968 | + | TC04G1452 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 58,271.75 Da | 33.98 | 86.77 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 427 | 489 | 1.9E-12 | IPR032838 |
| Pfam | PF00092 | von Willebrand factor type A domain | 79 | 235 | 1.1E-20 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 75 | 237 | 4.6E-27 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 78 | 251 | 3.6E-35 | IPR036465 |
| SMART | SM00327 | VWA_4 | 77 | 245 | 2.7E-18 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 79 | 253 | 16.592644 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 482 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54780.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_028110410.1 | E3 ubiquitin-protein ligase WAV3-like [Camellia sinensis] | 0 |
| TrEMBL | A0A2P5FT01 | von Willebrand factor, type A OS=Trema orientale OX=63057 GN=TorRG33x02_031090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology