Basic Information
Locus ID:
TC04G1247
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 55420203 | 55428479 | + | TC04G1247 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 199,897.89 Da | 52.93 | 74.14 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1515 | 1778 | 1.05072E-148 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 378 | 650 | 1.18649E-125 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 399 | 646 | 6.8E-32 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1554 | 1720 | 5.0E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1506 | 1778 | 1.05E-80 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 33 | 111 | 5.28E-8 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 444 | 616 | 1.23E-38 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 443 | 616 | 3.5E-50 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1636 | 1779 | 9.7E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1478 | 1635 | 1.9E-37 | IPR027484 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 32 | 112 | 1.3E-5 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1488 | 1779 | 2.1E-117 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1459 | 1778 | 58.489014 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 35 | 108 | 9.639696 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1359 | 1384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1359 | 1377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 263 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_034693168.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Vitis riparia] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B6ZR21 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Davidia involucrata OX=16924 GN=Din_016210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology