Basic Information
Locus ID:
TC04G0987
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 40865638 | 40878519 | - | TC04G0987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 104,122.27 Da | 30.71 | 91.92 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 632 | 898 | 8.20061E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 59 | 1.1E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 627 | 893 | 3.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 605 | 896 | 9.85E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 388 | 9.69E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 417 | 1.3E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 915 | 4.5E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 180 | 3.5E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 280 | 5.3E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 602 | 700 | 5.8E-35 | - |
| SMART | SM00220 | serkin_6 | 626 | 898 | 1.4E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 626 | 899 | 38.562511 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 632 | 653 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 745 | 757 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021861915.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Spinacia oleracea] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6ZV52 | Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_016064 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology