Basic Information
Locus ID:
TC04G0986
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 40830133 | 40835270 | - | TC04G0986 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 103,342.36 Da | 29.25 | 95.22 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 652 | 918 | 4.12966E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 647 | 913 | 1.0E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 404 | 1.19E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 623 | 916 | 8.9E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 623 | 721 | 1.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 722 | 933 | 1.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 187 | 4.3E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 423 | 5.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 287 | 3.3E-19 | IPR032675 |
| SMART | SM00220 | serkin_6 | 646 | 919 | 3.5E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 646 | 928 | 40.343395 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 652 | 674 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 766 | 778 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 931 | 953 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_016538907.2 | leucine-rich repeat receptor protein kinase HPCA1 isoform X1 [Capsicum annuum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2V0M9 | Putative leucine-rich repeat receptor-like protein kinase OS=Capsicum baccatum OX=33114 GN=CQW23_33859 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology