Basic Information
Locus ID:
TC04G0340
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 9946217 | 9947566 | - | TC04G0340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 47,512.61 Da | 43.37 | 101.20 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 151 | 210 | 2.7E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 88 | 2.1E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 410 | 7.14E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 217 | 271 | 2.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 216 | 2.0E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 412 | 5.7E-14 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_012091242.1 | receptor-like protein 12 [Jatropha curcas] | 0 |
| TrEMBL | A0A067JA93 | LRRNT_2 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_21143 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology