Basic Information
Locus ID:
TC04G0169
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 4999785 | 5001790 | + | TC04G0169 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 35,747.21 Da | 33.59 | 92.29 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 23 | 323 | 1.7E-72 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 15 | 325 | 4.32E-79 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 9 | 323 | 7.6E-98 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 281 | 327 | 1.3 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 2 | 210 | 5.3E-10 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 10 | 324 | 47.771069 | IPR003726 |
| Coils | Coil | Coil | 90 | 110 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_039040033.1 | homocysteine S-methyltransferase 1-like [Hibiscus syriacus] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BGY3 | Putative homocysteine S-methyltransferase 1 OS=Davidia involucrata OX=16924 GN=Din_037225 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology