Basic Information
Locus ID:
TC04G0106
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 3305113 | 3309221 | + | TC04G0106 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 54,846.05 Da | 36.96 | 87.01 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 32 | 351 | 1.7E-80 | IPR000490 |
| Pfam | PF07983 | X8 domain | 369 | 439 | 8.5E-17 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 32 | 351 | 2.96E-86 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 362 | 459 | 7.9E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 31 | 357 | 1.1E-114 | - |
| SMART | SM00768 | X8_cls | 368 | 453 | 4.4E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 266 | 279 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_034688118.1 | glucan endo-1,3-beta-glucosidase 3 isoform X1 [Vitis riparia] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | D7T8M9 | glucan endo-1,3-beta-D-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_01s0011g05500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology