Basic Information
Locus ID:
TC03G2988
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 117390136 | 117391866 | - | TC03G2988 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.92 | 63,153.44 Da | 48.26 | 81.06 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 56 | 328 | 5.9E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 334 | 2.43E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 338 | 6.0E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 139 | 7.7E-21 | - |
| SMART | SM00220 | serkin_6 | 52 | 334 | 4.9E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 52 | 338 | 32.739304 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 183 | 195 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 58 | 82 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 426 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28390.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006433873.1 | serine/threonine-protein kinase-like protein At1g28390 [Citrus clementina] | 0 |
| Q9SGN7 | Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana OX=3702 GN=At1g28390 PE=2 SV=1 | 0 | |
| TrEMBL | V4SHE8 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000878mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology