Basic Information
Locus ID:
TC03G2847
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 113036298 | 113038388 | + | TC03G2847 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 77,372.54 Da | 46.73 | 90.53 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 262 | 2.17044E-70 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 373 | 587 | 1.6E-40 | IPR001245 |
| Pfam | PF00139 | Legume lectin domain | 31 | 262 | 7.1E-53 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 641 | 2.32E-75 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 31 | 262 | 7.46E-51 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 23 | 268 | 5.6E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 648 | 1.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 448 | 7.5E-28 | - |
| SMART | SM00220 | serkin_6 | 370 | 650 | 1.3E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 650 | 35.679176 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 495 | 507 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 376 | 398 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_030955918.1 | L-type lectin-domain containing receptor kinase S.6 [Quercus lobata] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7N2KUC4 | Protein kinase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology