Basic Information
Locus ID:
TC03G1901
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 82516654 | 82538788 | - | TC03G1901 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 104,474.45 Da | 44.48 | 75.98 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 580 | 620 | 2.04711E-18 | - |
| Pfam | PF16135 | Tify domain binding domain | 319 | 374 | 2.5E-15 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 518 | 562 | 1.0E-15 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 581 | 622 | 2.5E-7 | IPR019787 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 777 | 915 | 7.15E-8 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 566 | 622 | 1.28E-15 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 662 | 724 | 1.06E-8 | IPR011011 |
| Gene3D | G3DSA:3.40.630.30 | - | 764 | 932 | 1.0E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 665 | 726 | 3.8E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 566 | 652 | 5.3E-19 | IPR013083 |
| SMART | SM00249 | PHD_3 | 580 | 621 | 2.2E-9 | IPR001965 |
| SMART | SM00249 | PHD_3 | 668 | 723 | 2.9E-5 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 578 | 623 | 10.2999 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 581 | 620 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 452 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_028064136.1 | uncharacterized protein LOC114267301 isoform X1 [Camellia sinensis] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7N2QXB2 | PHD-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology