Basic Information
Locus ID:
TC03G1178
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 46299253 | 46315066 | - | TC03G1178 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 114,067.49 Da | 37.99 | 88.83 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 42 | 318 | 0.0 | - |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 616 | 813 | 2.4E-45 | IPR011682 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 359 | 451 | 1.7E-19 | IPR015341 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 895 | 1002 | 8.1E-11 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 43 | 354 | 3.2E-97 | IPR000602 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 460 | 1003 | 2.98E-139 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 31 | 357 | 8.34E-114 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 358 | 453 | 3.6E-27 | IPR028995 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 42 | 322 | 8.4E-123 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 323 | 401 | 1.4E-32 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 598 | 861 | 2.0E-92 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 882 | 1009 | 8.0E-34 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 474 | 597 | 3.2E-29 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 402 | 457 | 1.3E-19 | IPR037094 |
| SMART | SM00872 | Alpha_mann_mid_2 | 359 | 433 | 1.6E-19 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_043812025.1 | alpha-mannosidase At3g26720 isoform X1 [Manihot esculenta] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1BFI0 | Alpha-mannosidase OS=Herrania umbratica OX=108875 GN=LOC110426873 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology