Basic Information
Locus ID:
TC03G0814
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
WRKY4
Description:
WRKY transcription factor 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 29165351 | 29174120 | - | TC03G0814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 54,278.32 Da | 51.61 | 52.72 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 387 | 443 | 4.4E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 211 | 266 | 7.1E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 208 | 269 | 7.98E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 378 | 446 | 1.7E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 199 | 270 | 4.4E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 371 | 447 | 8.7E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 386 | 445 | 4.7E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 210 | 268 | 2.7E-36 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 381 | 446 | 37.998291 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 211 | 269 | 23.731882 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 357 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_034683906.1 | probable WRKY transcription factor 3 isoform X1 [Vitis riparia] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | J9ZZY2 | WRKY transcription factor 8 OS=Tamarix hispida OX=189793 GN=WRKY8 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology