Basic Information
Locus ID:
TC03G0574
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19088635 | 19096959 | + | TC03G0574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.12 | 60,030.83 Da | 52.05 | 72.99 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 225 | 366 | 6.7E-71 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 2 | 155 | 2.3E-45 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 7 | 142 | 3.86E-12 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 229 | 371 | 6.28E-26 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 10 | 139 | 6.3E-9 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 233 | 353 | 7.1E-16 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 426 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_021844663.1 | uncharacterized protein LOC110784508 isoform X1 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9QR12 | Actin cross-linking OS=Spinacia oleracea OX=3562 GN=SOVF_151110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology