Basic Information
Locus ID:
TC03G0269
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8177213 | 8180341 | - | TC03G0269 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.91 | 68,826.13 Da | 38.09 | 95.80 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 8.7E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 302 | 568 | 8.0E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 8.6E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 193 | 3.12E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 571 | 2.13E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 270 | 377 | 8.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 9.4E-55 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 590 | 2.7E-62 | - |
| SMART | SM00220 | serkin_6 | 301 | 556 | 7.7E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 556 | 35.269291 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 420 | 432 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 307 | 329 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 121 | 134 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 166 | 179 | 4.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 603 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 603 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_034697167.1 | protein NSP-INTERACTING KINASE 1-like [Vitis riparia] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5AUV9 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_032834 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology