Basic Information
Locus ID:
TC02G3623
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 124555347 | 124564800 | - | TC02G3623 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.07 | 81,167.90 Da | 47.19 | 88.24 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 193 | 383 | 3.6E-30 | IPR002524 |
| Pfam | PF10184 | Uncharacterized conserved protein (DUF2358) | 528 | 638 | 1.3E-37 | IPR018790 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 389 | 464 | 5.8E-13 | IPR027470 |
| SUPERFAMILY | SSF54427 | NTF2-like | 541 | 639 | 1.4E-10 | IPR032710 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 388 | 464 | 4.45E-16 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 186 | 385 | 4.05E-40 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 387 | 465 | 7.6E-17 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 188 | 383 | 1.5E-42 | IPR027469 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 191 | 464 | 1.2E-30 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79520.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_021749989.1 | metal tolerance protein 9-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9SAJ7 | Metal tolerance protein 9 OS=Arabidopsis thaliana OX=3702 GN=MTP9 PE=3 SV=2 | 0 | |
| TrEMBL | A0A7G2DVU5 | (thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS1407 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology