Basic Information
Locus ID:
TC02G2930
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 104145846 | 104169709 | - | TC02G2930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 95,776.96 Da | 53.82 | 75.93 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 181 | 320 | 1.20983E-29 | - |
| CDD | cd00821 | PH | 21 | 116 | 1.34785E-11 | - |
| Pfam | PF00169 | PH domain | 20 | 124 | 2.6E-13 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 181 | 325 | 7.4E-29 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 616 | 696 | 5.6E-22 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 181 | 375 | 5.1E-32 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 13 | 129 | 2.3E-18 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 8 | 127 | 2.4E-18 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 150 | 374 | 6.2E-39 | IPR008936 |
| SMART | SM00233 | PH_update | 19 | 127 | 3.5E-16 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 178 | 369 | 4.9E-23 | IPR000198 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 172 | 372 | 27.694534 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 18 | 125 | 15.7531 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 577 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 535 | 554 | - | - |
| Coils | Coil | Coil | 606 | 647 | - | - |
| Coils | Coil | Coil | 665 | 699 | - | - |
| Coils | Coil | Coil | 581 | 601 | - | - |
| Coils | Coil | Coil | 818 | 845 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_021734234.1 | rho GTPase-activating protein 7-like [Chenopodium quinoa] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S053 | Rho GTPase-activating protein 7-like OS=Spinacia oleracea OX=3562 GN=SOVF_009250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology