Basic Information
Locus ID:
TC02G2345
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 87856182 | 87872165 | - | TC02G2345 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 105,338.75 Da | 39.82 | 91.80 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 632 | 898 | 6.60544E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 197 | 236 | 2.2E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 71 | 1.3E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 273 | 289 | 1.7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 628 | 893 | 8.3E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 385 | 1.33E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 895 | 1.35E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 596 | 701 | 4.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 702 | 919 | 1.9E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 403 | 2.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 192 | 4.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 293 | 2.5E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 223 | 248 | 77.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 626 | 902 | 1.6E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 318 | 342 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 151 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 199 | 222 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 271 | 295 | 87.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 626 | 902 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 746 | 758 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 632 | 654 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 902 | 924 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 900 | 955 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37450.3 | - | 0 |
| RefSeq | XP_022735692.1 | probable LRR receptor-like serine/threonine-protein kinase At5g37450 [Durio zibethinus] | 0 |
| C0LGU1 | Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana OX=3702 GN=At5g37450 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J4ZHQ4 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_015093 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology