Basic Information
Locus ID:
TC02G2341
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 87776350 | 87798265 | - | TC02G2341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 104,716.67 Da | 36.78 | 97.49 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 626 | 892 | 1.17102E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 623 | 889 | 1.6E-45 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 5.4E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 295 | 344 | 2.0E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 385 | 8.84E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 605 | 916 | 3.42E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 696 | 901 | 5.8E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 292 | 5.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 185 | 3.3E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 382 | 7.2E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 592 | 695 | 1.1E-34 | - |
| SMART | SM00220 | serkin_6 | 620 | 896 | 5.5E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 620 | 893 | 37.855812 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 740 | 752 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 626 | 648 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021767435.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R8K6 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_094150 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology