Basic Information
Locus ID:
TC02G2302
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 86457550 | 86481345 | + | TC02G2302 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 111,531.84 Da | 31.96 | 91.78 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 705 | 967 | 4.94126E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 702 | 965 | 1.6E-46 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 300 | 359 | 1.4E-8 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 434 | 619 | 2.0E-43 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 967 | 2.46E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 108 | 386 | 1.09E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 287 | 3.5E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 660 | 774 | 1.3E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 978 | 9.3E-57 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 432 | 624 | 3.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 410 | 5.4E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 699 | 967 | 2.1E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 982 | 36.824028 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 324 | 346 | 7.257614 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 995 | 1014 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_030962003.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X2 [Quercus lobata] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8J4QRC8 | Protein kinase domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_022857 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology