Basic Information
Locus ID:
TC02G2154
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 81828427 | 81830450 | - | TC02G2154 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 53,649.03 Da | 46.27 | 80.16 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 362 | 433 | 3.1E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 347 | 3.0E-77 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 347 | 4.22E-80 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 449 | 2.4E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 26 | 355 | 1.0E-111 | - |
| SMART | SM00768 | X8_cls | 361 | 446 | 2.7E-45 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021728822.1 | glucan endo-1,3-beta-glucosidase 4-like [Chenopodium quinoa] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KLV4 | RRM domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology