Basic Information
Locus ID:
TC02G1744
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 70408891 | 70410484 | + | TC02G1744 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 13,500.25 Da | 57.58 | 91.09 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 68 | 109 | 3.9E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 66 | 109 | 2.88E-11 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 55 | 1.57E-5 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 57 | 118 | 1.0E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 66 | 112 | 9.841896 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004289225.1 | PREDICTED: F-box/LRR-repeat protein At3g58900-like isoform X1 [Fragaria vesca subsp. vesca] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Plantaginaceae | Plantago ovata | 1 | Pov_00007924 |
| Tamaricaceae | Tamarix chinensis | 2 | TC02G1744, TC02G1745 |