Basic Information
Locus ID:
TC02G1658
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 67831309 | 67842164 | + | TC02G1658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 61,264.18 Da | 36.33 | 82.24 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 70 | 328 | 5.4575E-140 | - |
| CDD | cd00051 | EFh | 448 | 510 | 1.0039E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 447 | 510 | 1.3E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 71 | 329 | 5.9E-76 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 389 | 439 | 8.7E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 344 | 6.88E-88 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 358 | 535 | 7.87E-44 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 337 | 1.3E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 338 | 512 | 4.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 156 | 2.1E-27 | - |
| SMART | SM00220 | serkin_6 | 71 | 329 | 8.1E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 448 | 476 | 0.0016 | IPR002048 |
| SMART | SM00054 | efh_1 | 484 | 512 | 8.6E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 376 | 404 | 0.021 | IPR002048 |
| SMART | SM00054 | efh_1 | 412 | 440 | 0.17 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 372 | 407 | 11.75176 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 444 | 479 | 13.09074 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 480 | 515 | 14.401823 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 408 | 443 | 9.659605 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 329 | 50.43507 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 493 | 505 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 421 | 433 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 191 | 203 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 457 | 469 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 77 | 100 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_015875906.2 | calcium-dependent protein kinase 8 [Ziziphus jujuba var. spinosa] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3KNV5 | Calcium-dependent protein kinase 8 OS=Corchorus olitorius OX=93759 GN=COLO4_06116 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology