Basic Information
Locus ID:
TC02G1405
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 59599321 | 59603031 | - | TC02G1405 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 92,138.03 Da | 46.75 | 86.42 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 508 | 761 | 8.8292E-86 | - |
| CDD | cd01989 | STK_N | 16 | 167 | 2.80978E-58 | - |
| Pfam | PF00582 | Universal stress protein family | 15 | 157 | 3.0E-13 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 506 | 760 | 3.7E-41 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 157 | 2.51E-14 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 484 | 761 | 2.6E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 575 | 778 | 1.2E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 479 | 574 | 3.8E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 14 | 167 | 9.6E-18 | IPR014729 |
| SMART | SM00220 | serkin_6 | 502 | 772 | 1.1E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 502 | 769 | 35.467167 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 620 | 632 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 833 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 245 | - | - |
| Coils | Coil | Coil | 365 | 392 | - | - |
| Coils | Coil | Coil | 400 | 484 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010252202.1 | PREDICTED: U-box domain-containing protein 35-like isoform X1 [Nelumbo nucifera] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A834ZL00 | Protein kinase domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_006493 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology