Basic Information
Locus ID:
TC02G0491
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 21044328 | 21060348 | - | TC02G0491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 74,532.40 Da | 42.02 | 89.91 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 358 | 615 | 1.50222E-86 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 270 | 4.79813E-55 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 30 | 273 | 8.6E-44 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 353 | 613 | 9.2E-49 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 273 | 8.86E-46 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 336 | 623 | 4.99E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 428 | 4.1E-33 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 28 | 289 | 6.3E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 623 | 1.3E-57 | - |
| SMART | SM00220 | serkin_6 | 352 | 623 | 7.6E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 623 | 38.760387 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 470 | 482 | - | IPR008271 |
| ProSitePatterns | PS00308 | Legume lectins alpha-chain signature. | 241 | 250 | - | IPR000985 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 381 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021769327.1 | L-type lectin-domain containing receptor kinase IX.1-like [Chenopodium quinoa] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RB73 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_092870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg36599, jg36601 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17867 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah034687, Ah034688, Ah034689 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g030170 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21591, Sbi_jg22231 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg16156, Seu_jg16157, Seu_jg16158 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00008756, GOSA_00008758, GOSA_00008759, GOSA_00008760 |
| Amaranthaceae | Suaeda glauca | 9 | Sgl62700, Sgl62701, Sgl62702, Sgl62703, Sgl67262, Sgl67321 ... |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000017184, gene:ENSEOMG00000019633 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1BG0021020, CQ.Regalona.r1.2AG0022820 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30249920 |
| Apiaceae | Apium graveolens | 1 | Ag4G01692 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2332 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2537 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG04.3036, evm.TU.LG04.3038, evm.TU.LG16.568 ... |
| Salicaceae | Populus euphratica | 2 | populus_peu04773, populus_peu04774 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027672, gene-LOC114073871 |
| Tamaricaceae | Reaumuria soongarica | 4 | STRG.32911_chr09_-, STRG.32912_chr09_-, gene_17258 ... |
| Tamaricaceae | Tamarix chinensis | 5 | TC01G1529, TC01G1531, TC02G0491, TC02G0493, TC02G0500 |