Basic Information
Locus ID:
TC01G4622
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 164333590 | 164342416 | + | TC01G4622 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 46,181.48 Da | 43.78 | 80.67 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 341 | 389 | 3.7E-9 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 78 | 289 | 2.88E-23 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 336 | 397 | 6.83E-17 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 78 | 308 | 3.0E-14 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 320 | 403 | 2.3E-16 | - |
| SMART | SM00326 | SH3_2 | 337 | 392 | 1.9E-15 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 334 | 393 | 20.379915 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 308 | - | - |
| Coils | Coil | Coil | 224 | 244 | - | - |
| Coils | Coil | Coil | 36 | 56 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_048131760.1 | SH3 domain-containing protein 2 [Rhodamnia argentea] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8MYP5 | SH3 domain-containing protein 2-like isoform X2 OS=Rhodamnia argentea OX=178133 GN=LOC115728994 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology