Basic Information
Locus ID:
TC01G4558
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 162807809 | 162816289 | - | TC01G4558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 60,851.55 Da | 46.60 | 73.49 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 492 | 528 | 6.6E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 363 | 398 | 9.1E-5 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 286 | 339 | 7.8E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 403 | 443 | 0.0039 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 233 | 536 | 8.55E-62 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 224 | 533 | 3.1E-125 | IPR015943 |
| SMART | SM00320 | WD40_4 | 318 | 355 | 0.037 | IPR001680 |
| SMART | SM00320 | WD40_4 | 489 | 528 | 2.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 359 | 398 | 6.7E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 275 | 315 | 0.0016 | IPR001680 |
| SMART | SM00320 | WD40_4 | 401 | 443 | 2.5E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 231 | 272 | 100.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 283 | 324 | 9.840087 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 496 | 529 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 366 | 407 | 13.68318 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 496 | 529 | 14.41838 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 366 | 398 | 10.706503 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 515 | 529 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 76 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_034674369.1 | protein FIZZY-RELATED 2-like [Vitis riparia] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5C8S6 | Guanine nucleotide-binding protein, beta subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_173860 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology