Basic Information
Locus ID:
TC01G4339
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 155444096 | 155451781 | - | TC01G4339 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 78,510.91 Da | 47.01 | 80.95 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 93 | 182 | 1.24114E-7 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 437 | 684 | 5.89645E-114 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 431 | 684 | 2.6E-64 | IPR001245 |
| Pfam | PF00989 | PAS fold | 74 | 177 | 3.1E-9 | IPR013767 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 414 | 684 | 3.51E-75 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 74 | 182 | 8.55E-15 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 88 | 184 | 5.5E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 424 | 508 | 2.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 510 | 697 | 1.2E-56 | - |
| SMART | SM00091 | pas_2 | 72 | 139 | 9.1E-4 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 92 | 179 | 2.2E-9 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 93 | 142 | 10.875991 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 431 | 688 | 41.247971 | IPR000719 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 592 | 602 | 6.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 545 | 563 | 6.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 505 | 518 | 6.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 611 | 633 | 6.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 655 | 677 | 6.6E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 418 | - | - |
| Coils | Coil | Coil | 19 | 46 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_050265562.1 | U-box domain-containing protein 35 [Quercus robur] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J4ZVC8 | Serine/threonine-protein kinase CTR1 OS=Nyssa sinensis OX=561372 GN=F0562_012697 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology