Basic Information
Locus ID:
TC01G4116
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
S-type anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 149230957 | 149233435 | - | TC01G4116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 72,904.68 Da | 53.20 | 84.79 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 251 | 555 | 8.29356E-105 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 252 | 556 | 6.1E-45 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 248 | 566 | 5.0E-66 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 189 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_010676623.1 | guard cell S-type anion channel SLAC1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834YC08 | Guard cell S-type anion channel SLAC1 OS=Tetracentron sinense OX=13715 GN=HHK36_028775 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology