Basic Information
Locus ID:
TC01G3249
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 120762471 | 120775706 | + | TC01G3249 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 62,346.21 Da | 50.23 | 74.95 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 22 | 171 | 2.3E-50 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 245 | 386 | 1.3E-72 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 249 | 391 | 5.23E-25 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 29 | 171 | 1.77E-15 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 30 | 157 | 2.7E-11 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 253 | 373 | 4.5E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 456 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_010683295.1 | uncharacterized protein LOC104898002 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A7C8ZKK4 | DUF569 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology