halophFGD

Basic Information

Locus ID: TC01G3219

Species & Taxonomic ID: Tamarix chinensis & 189791

Genome Assembly: GCA_030549775.1

Description: UPF0392 protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	119797649	119801334	-	TC01G3219

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.58	16,322.97 Da	43.12	66.20	-0.76

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01697	Glycosyltransferase family 92	17	121	3.3E-15	IPR008166

Best hit

Source	Best Hit ID	Description
TAIR	AT1G27200.1	Domain of unknown function (DUF23).
RefSeq	XP_021613939.1	glycosyltransferase family 92 protein RCOM_0530710 [Manihot esculenta]
Swiss-Prot	B9S2H4	Glycosyltransferase family 92 protein RCOM_0530710 OS=Ricinus communis OX=3988 GN=RCOM_0699480 PE=3 SV=1
TrEMBL	A0A2C9VX69	Glycosyltransferase family 92 protein OS=Manihot esculenta OX=3983 GN=MANES_05G093600 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg19879, jg22566, jg30440, jg40430, jg5454, jg7077, jg9410
Aizoaceae	Mesembryanthemum crystallinum	2	gene_3695, gene_8343
Amaranthaceae	Atriplex hortensis	2	Ah013394, Ah035866
Amaranthaceae	Beta vulgaris	1	BVRB_6g155260
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg39846, Sbi_jg42336, Sbi_jg44921, Sbi_jg55181
Amaranthaceae	Salicornia europaea	2	Seu_jg14482, Seu_jg27210
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00002337, GOSA_00014244
Amaranthaceae	Suaeda glauca	4	Sgl12378, Sgl17658, Sgl31920, Sgl37198
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000000259, gene:ENSEOMG00000002552 ... gene:ENSEOMG00000026665, gene:ENSEOMG00000036817, gene:ENSEOMG00000049746
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.1BG0001010, CQ.Regalona.r1.6AG0006770 ... CQ.Regalona.r1.6BG0007230
Anacardiaceae	Pistacia vera	2	pistato.v30023790, pistato.v30024110
Apiaceae	Apium graveolens	4	Ag11G03523, Ag3G02569, Ag5G02172, Ag7G01969
Arecaceae	Cocos nucifera	3	COCNU_08G003460, COCNU_11G002060, scaffold007915G000030
Arecaceae	Phoenix dactylifera	4	gene-LOC103701178, gene-LOC103713611, gene-LOC103714496 ... gene-LOC103724201
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.2135.V1.1, AsparagusV1_04.577.V1.1 ... AsparagusV1_10.1738.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G00736, Ftri17G06474, Ftri18G04790, Ftri18G19374
Brassicaceae	Arabidopsis thaliana	4	AT1G27200.1, AT3G27330.1, AT4G37420.1, AT5G40720.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10003629m.g.v1.0, Thhalv10007185m.g.v1.0 ... Thhalv10027280m.g.v1.0, Thhalv10028205m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g21570.v2.2, Sp2g16520.v2.2, Sp7g35080.v2.2
Brassicaceae	Brassica nigra	6	BniB02g067500.2N, BniB03g019120.2N, BniB04g007320.2N ... BniB04g039560.2N, BniB05g001520.2N, BniB06g059600.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1944, Ceq03G1139, Ceq07G0876
Casuarinaceae	Casuarina glauca	3	Cgl02G2017, Cgl03G1232, Cgl07G0922
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno07g12990, gene.Cymno10g08230
Dunaliellaceae	Dunaliella salina	2	Dusal.0075s00016.v1.0, Dusal.0488s00008.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate08g17390, gene.Thate09g12410
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG03.881, evm.TU.LG05.207, evm.TU.LG06.75
Plantaginaceae	Plantago ovata	3	Pov_00023144, Pov_00024225, Pov_00027716
Plumbaginaceae	Limonium bicolor	2	Lb3G19875, Lb6G31768
Poaceae	Echinochloa crus-galli	7	AH06.3039, AH08.191, BH06.2826, BH08.162, CH08.52 ... Contig1701.3, Contig181.183
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_8AG0615900, gene-QOZ80_8BG0643190
Poaceae	Hordeum vulgare	9	HORVU.MOREX.r3.4HG0342210.1.CDS1 ... HORVU.MOREX.r3.4HG0342260.1.CDS1, HORVU.MOREX.r3.4HG0342280.1.CDS1, HORVU.MOREX.r3.4HG0343590.1.CDS1, HORVU.MOREX.r3.4HG0343650.1.CDS1, HORVU.MOREX.r3.6HG0573570.1.CDS1, HORVU.MOREX.r3.6HG0617970.1.CDS1, HORVU.MOREX.r3.7HG0703730.1, HORVU.MOREX.r3.7HG0751450.1.CDS1
Poaceae	Lolium multiflorum	13	gene-QYE76_002279, gene-QYE76_018629, gene-QYE76_018635 ... gene-QYE76_021072, gene-QYE76_021238, gene-QYE76_021978, gene-QYE76_028067, gene-QYE76_033503, gene-QYE76_037085, gene-QYE76_037319, gene-QYE76_046903, gene-QYE76_048234, gene-QYE76_067982
Poaceae	Oryza coarctata	3	Oco12G017900, Oco15G001020, Oco16G001180
Poaceae	Oryza sativa	2	LOC_Os06g51210.1, LOC_Os08g02850.1
Poaceae	Paspalum vaginatum	2	gene-BS78_07G025600, gene-BS78_10G263400
Poaceae	Puccinellia tenuiflora	13	Pt_Chr0100010, Pt_Chr0100011, Pt_Chr0202293, Pt_Chr0206395 ... Pt_Chr0206434, Pt_Chr0207194, Pt_Chr0303783, Pt_Chr0303792, Pt_Chr0402594, Pt_Chr0603583, Pt_Chr0603669, Pt_Chr0603672, Pt_Chr0702845
Poaceae	Sporobolus alterniflorus	6	Chr0G007260, Chr0G021780, Chr10G022470, Chr17G000430 ... Chr20G013000, Chr29G012340
Poaceae	Thinopyrum elongatum	6	Tel6E01G324300, Tel6E01G334500, Tel6E01G336800 ... Tel6E01G571100, Tel7E01G539800, Tel7E01G959200
Poaceae	Triticum dicoccoides	12	gene_TRIDC6AG023390, gene_TRIDC6AG023730 ... gene_TRIDC6AG023990, gene_TRIDC6AG048400, gene_TRIDC6BG029150, gene_TRIDC6BG029270, gene_TRIDC6BG031730, gene_TRIDC6BG056570, gene_TRIDC7AG043790, gene_TRIDC7AG076580, gene_TRIDC7BG035060, gene_TRIDC7BG073360
Poaceae	Triticum aestivum	21	TraesCS4A02G230900.1.cds1, TraesCS4A02G231000.1.cds1 ... TraesCS4D02G075500.1.cds1, TraesCS4D02G083000.1.cds1, TraesCS6A02G165300.1, TraesCS6A02G166400.1, TraesCS6A02G322700.1.cds1, TraesCS6B02G193800.1.cds1, TraesCS6B02G193900.1.cds1, TraesCS6B02G195000.1, TraesCS6B02G205700.1.cds1, TraesCS6B02G353400.1.cds1, TraesCS6D02G155000.1, TraesCS6D02G165900.1.cds1, TraesCS6D02G302600.1.cds1, TraesCS7A02G313700.1, TraesCS7A02G550900.1.cds1, TraesCS7B02G214400.1, TraesCS7B02G474300.1.cds1, TraesCS7D02G310300.1, TraesCS7D02G536800.1.cds1
Poaceae	Zea mays	2	Zm00001eb173440_P001, Zm00001eb271980_P001
Poaceae	Zoysia japonica	1	nbis-gene-41463
Poaceae	Zoysia macrostachya	2	Zma_g23545, Zma_g31172
Portulacaceae	Portulaca oleracea	5	evm.TU.LG03.333, evm.TU.LG12.1372, evm.TU.LG13.280 ... evm.TU.LG18.856, evm.TU.LG20.1020
Posidoniaceae	Posidonia oceanica	3	gene.Posoc05g01220, gene.Posoc06g15020, gene.Posoc06g15030
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_15_RagTag.687, evm.TU.Scaffold_3_RagTag.1982 ... evm.TU.Scaffold_6_RagTag.74, evm.TU.Scaffold_8_RagTag.1358
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-26872, nbisL1-mrna-9150
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-18191, nbisL1-mrna-19349, nbisL1-mrna-4702 ... nbisL1-mrna-6797
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-15295, nbisL1-mrna-15696, nbisL1-mrna-3133 ... nbisL1-mrna-66
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000001l.205, add.evm.TU.utg000018l.86 ... evm.TU.utg000011l.53, evm.TU.utg000019l.29
Rhizophoraceae	Kandelia obovata	2	Maker00001634, Maker00007146
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-11999, nbisL1-mrna-20534, nbisL1-mrna-21204 ... nbisL1-mrna-21505
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-17517, nbisL1-mrna-17816, nbisL1-mrna-18732
Salicaceae	Populus euphratica	7	populus_peu01177, populus_peu07758, populus_peu15482 ... populus_peu21889, populus_peu33124, populus_peu37634, populus_peu37710
Solanaceae	Lycium barbarum	4	gene-LOC132601899, gene-LOC132622048, gene-LOC132624038 ... gene-LOC132641444
Solanaceae	Solanum chilense	4	SOLCI000009200, SOLCI005052300, SOLCI005853000 ... SOLCI007143200
Solanaceae	Solanum pennellii	4	gene-LOC107006574, gene-LOC107009523, gene-LOC107017078 ... gene-LOC107018609
Tamaricaceae	Reaumuria soongarica	2	STRG.13995_chr05_-, STRG.31448_chr11_+
Tamaricaceae	Tamarix chinensis	4	TC01G3219, TC01G3220, TC03G0537, TC03G1233
Zosteraceae	Zostera marina	2	Zosma05g08070.v3.1, Zosma05g23580.v3.1