halophFGD

Basic Information

Locus ID: TC01G3075

Species & Taxonomic ID: Tamarix chinensis & 189791

Genome Assembly: GCA_030549775.1

Description: Pleckstrin homology domain.

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	114010894	114011963	+	TC01G3075

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.88	22,502.18 Da	57.44	93.00	-0.27

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00169	PH domain	62	169	7.7E-6	IPR001849
SUPERFAMILY	SSF50729	PH domain-like	61	169	2.35E-11	-
Gene3D	G3DSA:2.30.29.30	-	57	184	7.1E-9	IPR011993
SMART	SM00233	PH_update	59	175	0.0013	IPR001849
ProSiteProfiles	PS50003	PH domain profile.	58	173	7.8989	IPR001849

KEGG Pathway

KO Term:

K00940 (nucleoside-diphosphate kinase [EC:2.7.4.6])

Pathway:

ko00230 (Purine metabolism) map00230 (Purine metabolism) ko00240 (Pyrimidine metabolism) map00240 (Pyrimidine metabolism) ko00983 (Drug metabolism - other enzymes) map00983 (Drug metabolism - other enzymes) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant)

Module:

M00049 (Adenine ribonucleotide biosynthesis, IMP => ADP,ATP) M00050 (Guanine ribonucleotide biosynthesis, IMP => GDP,GTP) M00052 (Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP) M00053 (Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP)

Reaction:

R00124 (ATP + ADP <=> ADP + ATP) R00139 (2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate + ATP <=> 2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate + ADP) R00156 (ATP + UDP <=> ADP + UTP) R00330 (ATP + GDP <=> ADP + GTP) R00570 (ATP + CDP <=> ADP + CTP) R00722 (ATP + IDP <=> ADP + ITP) R01137 (ATP + dADP <=> ADP + dATP) R01857 (ATP + dGDP <=> ADP + dGTP) R02093 (ATP + dTDP <=> ADP + dTTP) R02326 (ATP + dCDP <=> ADP + dCTP) R02331 (ATP + dUDP <=> ADP + dUTP) R03530 (ATP + dIDP <=> ADP + dITP) R11894 (ATP + 5-Fluorouridine diphosphate <=> ADP + 5-Fluorouridine triphosphate) R11895 (ATP + 5-Fluorodeoxyuridine diphosphate <=> ADP + 5-Fluorodeoxyuridine triphosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23895.1	Pleckstrin homology (PH) domain-containing protein.
RefSeq	XP_028084484.1	uncharacterized protein LOC114285620 isoform X2 [Camellia sinensis]
TrEMBL	A0A6A6L941	PH domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_006203 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg23562, jg7698
Aizoaceae	Mesembryanthemum crystallinum	1	gene_15146
Amaranthaceae	Atriplex hortensis	1	Ah003878
Amaranthaceae	Beta vulgaris	1	BVRB_5g098770
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg24038, Sbi_jg7886
Amaranthaceae	Salicornia europaea	1	Seu_jg12159
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00010649
Amaranthaceae	Suaeda glauca	2	Sgl52218, Sgl57490
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000004303, gene:ENSEOMG00000023988 ... gene:ENSEOMG00000025183
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.5AG0005760
Arecaceae	Cocos nucifera	2	COCNU_06G005220, COCNU_14G003430
Arecaceae	Phoenix dactylifera	2	gene-LOC103709541, gene-LOC103714194
Asparagaceae	Asparagus officinalis	1	AsparagusV1_05.1974.V1.1
Asteraceae	Flaveria trinervia	1	Ftri13G33548
Brassicaceae	Arabidopsis thaliana	1	AT4G23895.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10026064m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp7g21860.v2.2
Brassicaceae	Brassica nigra	2	BniB02g080860.2N, BniB03g013680.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G0572
Casuarinaceae	Casuarina glauca	1	Cgl03G0680
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno16g03310
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate03g12100
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-12162
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG10.1544
Plantaginaceae	Plantago ovata	1	Pov_00028475
Plumbaginaceae	Limonium bicolor	2	Lb2G08132, Lb2G13687
Poaceae	Echinochloa crus-galli	3	BH05.1237, CH01.2734, CH05.1468
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_5AG0392410, gene-QOZ80_5BG0438780
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.1HG0095220.1
Poaceae	Oryza coarctata	2	Oco09G018560, Oco10G018520
Poaceae	Oryza sativa	1	LOC_Os05g51710.1
Poaceae	Paspalum vaginatum	1	gene-BS78_09G261300
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0200596, Pt_Chr0505947
Poaceae	Sporobolus alterniflorus	2	Chr04G016110, Chr06G016850
Poaceae	Thinopyrum elongatum	1	Tel1E01G751800
Poaceae	Triticum dicoccoides	2	gene_TRIDC1AG037210, gene_TRIDC1BG074430
Poaceae	Triticum aestivum	4	TraesCS1A02G350700.1, TraesCS1B02G478900.1 ... TraesCS1D02G452400.1, TraesCS2A02G207700.1
Poaceae	Zea mays	1	Zm00001eb297840_P001
Poaceae	Zoysia japonica	1	nbis-gene-30212
Poaceae	Zoysia macrostachya	1	Zma_g25903
Portulacaceae	Portulaca oleracea	4	evm.TU.LG04.3268, evm.TU.LG10.111, evm.TU.LG16.333 ... evm.TU.LG17.111
Posidoniaceae	Posidonia oceanica	1	gene.Posoc09g05330
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_14_RagTag.96
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-18307
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-8633
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000007l.336
Rhizophoraceae	Kandelia obovata	1	Maker00018472
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-15965
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-10997
Salicaceae	Populus euphratica	2	populus_peu03693, populus_peu34541
Solanaceae	Lycium barbarum	3	gene-LOC132603801, gene-LOC132620383, gene-LOC132634778
Solanaceae	Solanum chilense	2	SOLCI002348700, SOLCI006524800
Solanaceae	Solanum pennellii	2	gene-LOC107005558, gene-LOC107027896
Tamaricaceae	Reaumuria soongarica	2	STRG.23324_chr05_-, gene_9672
Tamaricaceae	Tamarix chinensis	2	TC01G3075, TC06G0102
Zosteraceae	Zostera marina	1	Zosma05g05480.v3.1