Basic Information
Locus ID:
TC01G3027
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 112556174 | 112566805 | - | TC01G3027 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 82,195.43 Da | 43.18 | 111.11 | 0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 168 | 2.7E-36 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 189 | 347 | 2.9E-29 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 360 | 630 | 9.4E-70 | IPR003864 |
| Coils | Coil | Coil | 275 | 295 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69450.1 | Early-responsive to dehydration stress protein (ERD4). | 0 |
| RefSeq | XP_031386213.1 | CSC1-like protein At1g69450 isoform X1 [Punica granatum] | 0 |
| F4I248 | CSC1-like protein At1g69450 OS=Arabidopsis thaliana OX=3702 GN=At1g69450 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I0L480 | CSC1-like protein At1g69450 isoform X1 OS=Punica granatum OX=22663 GN=LOC116199818 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology