Basic Information
Locus ID:
TC01G3019
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 112316424 | 112321765 | + | TC01G3019 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 56,684.40 Da | 63.77 | 61.59 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 409 | 465 | 3.3E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 234 | 289 | 9.1E-27 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 400 | 468 | 1.18E-28 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 231 | 291 | 3.01E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 393 | 469 | 9.9E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 226 | 292 | 9.1E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 408 | 467 | 9.0E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 232 | 290 | 2.7E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 403 | 468 | 37.068623 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 234 | 291 | 24.328707 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 224 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_027096695.1 | probable WRKY transcription factor 4 [Coffea arabica] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | J9ZZY2 | WRKY transcription factor 8 OS=Tamarix hispida OX=189793 GN=WRKY8 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology