Basic Information
Locus ID:
TC01G2872
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 108505406 | 108508251 | - | TC01G2872 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 74,469.99 Da | 38.44 | 94.27 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 420 | 680 | 1.45834E-92 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 191 | 211 | 0.4 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 71 | 129 | 2.0E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 417 | 680 | 2.4E-40 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 235 | 1.65E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 680 | 6.6E-59 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 251 | 1.7E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 139 | 2.1E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 387 | 492 | 5.7E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 493 | 684 | 5.2E-41 | - |
| SMART | SM00369 | LRR_typ_2 | 212 | 235 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 211 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 681 | 31.226965 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 420 | 442 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 297 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021736023.1 | probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Chenopodium quinoa] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LR13 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology