Basic Information
Locus ID:
TC01G2578
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 98114667 | 98117907 | - | TC01G2578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 114,339.04 Da | 32.94 | 104.79 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 461 | 521 | 2.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 151 | 209 | 8.1E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 101 | 113 | 0.69 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 700 | 990 | 2.0E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 295 | 317 | 0.89 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 224 | 281 | 7.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 71 | 1.4E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 695 | 997 | 1.11E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 294 | 613 | 1.73E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 383 | 6.8E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 1011 | 5.3E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 681 | 774 | 1.5E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 190 | 7.4E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 458 | 2.0E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 292 | 5.3E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 459 | 635 | 1.5E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 386 | 1.3E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 196 | 290.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 698 | 999 | 1.6E-22 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 532 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 222 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 0.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 580 | 64.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 698 | 1013 | 36.315205 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 844 | 856 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 704 | 728 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 7.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 296 | 309 | 7.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739110.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology