Basic Information
Locus ID:
TC01G2513
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 95813836 | 95824877 | + | TC01G2513 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 63,311.54 Da | 46.03 | 73.04 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 230 | 266 | 0.15 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 42 | 561 | 6.78E-32 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 39 | 567 | 2.7E-22 | IPR015943 |
| SMART | SM00320 | WD40_4 | 110 | 150 | 6.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 227 | 266 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 34 | 69 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 277 | 317 | 17.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 449 | 480 | 230.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 14 | 393 | 2.1E-141 | IPR000009 |
| PIRSF | PIRSF037309 | PPA2_B55 | 403 | 569 | 1.3E-46 | IPR000009 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 236 | 250 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 110 | 124 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 323 | 350 | 2.1E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 238 | 265 | 2.1E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 538 | 567 | 2.1E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 48 | 68 | 2.1E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 266 | 293 | 2.1E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 294 | 322 | 2.1E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 351 | 378 | 2.1E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 126 | 154 | 2.1E-107 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 516 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_043718513.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Telopea speciosissima] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8AAG8 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Nelumbo nucifera OX=4432 GN=LOC104600770 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology